There are over 150 clinics in 40 countries using BoneXpert with at least 100 analyses per year. The following clinics have given us permission to be mentioned (a few of them do less than 100 per year).
| Diagnose Zentrum Urania | Austria |
| Landeskrankenhaus Leoben | Austria |
| Universitair Ziekenhuis Brussel | Belgium |
| Hôpital Universitaire des Enfants Reine Fabiola (HUDERF) | Belgium |
| AZ Delta Roeselare | Belgium |
| ZNA Koningin Paola Kinderziekenhuis, Antwerpen | Belgium |
| Clinica Alemana de Santiago | Chile |
| Motol University Hospital, Prague | Czech Republic |
| Hospitalsenheden Midt, Viborg-Skive | Denmark |
| Sjællands Universitetshospital, Roskilde | Denmark |
| Rigshospitalet | Denmark |
| Nordsjællands Hospital – Hillerød | Denmark |
| Aalborg Universitetshospital | Denmark |
| Holbæk Sygehus | Denmark |
| Regionshospitalet Herning | Denmark |
| Næstved Sygehus | Denmark |
| Sydvestjysk Sygehus, Esbjerg | Denmark |
| Herlev Hospital | Denmark |
| Aarhus Universitetshospital / Skejby Sygehus | Denmark |
| Odense Universitetshospital/Svendborg | Denmark |
| Seinäjoki City Hospital | Finland |
| Helsinki University Hospital (HUS) | Finland |
| Kuopio University Hospital | Finland |
| Centre Hospitalier Universitaire Toulouse | France |
| Centre Hospitalier Robert Bisson, Lisieux | France |
| Universitätsklinikum Heidelberg | Germany |
| Klinikum Stuttgart: Olgahospital | Germany |
| Sana Klinikum Lichtenberg | Germany |
| Helios Kliniken Krefeld | Germany |
| Universitätsklinikum Köln | Germany |
| Klinikum Ludwigsburg | Germany |
| Hartmann Diagnostic Service | Germany |
| Klinikum Augsburg | Germany |
| Klinikum Kassel | Germany |
| Domus Medica, Reykjavik | Iceland |
| Regency Hospital Ltd., Kanpur | India |
| Istituto Giannina Gaslini, Genova | Italy |
| Ospedale Valduce – Como | Italy |
| Bambino Gesù Hospital, Rome | Italy |
| Ospedale San Raffaele, Milano | Italy |
| Scheper Ziekenhuis | Netherlands |
| Rijnstate Hospital | Netherlands |
| Academic Medical Centre (AMC) Amsterdam | Netherlands |
| Erasmus MC | Netherlands |
| Radboudumc, Nijmegen | Netherlands |
| Leiden University Medical Center (LUMC) | Netherlands |
| University Medical University Centre Utrecht (UMCU) | Netherlands |
| Helse Vest IKT | Norway |
| Haugesund Sjukehus Helse Fonna | Norway |
| Stavanger Universitetssjukehus | Norway |
| Haukeland Universitetssykehus | Norway |
| Children’s Relief Bethlehem, Caritas Baby Hospital | Palestine |
| Instituto Português de Oncologia Lisboa (IPOL) | Portugal |
| Skånevård Kryh (Centralsjukhuset i Kristianstad, Lasarettet i Ystad og Hässleholms sjukhus) | Sweden |
| Länssjukhuset Ryhov Jönköping | Sweden |
| Skånevård Sund (Ängelholms sjukhus, Lasarettet Trelleborg, Helsingborgs lasarett og Lasarettet i Landskrona) | Sweden |
| Skånes universitetssjukhus (SUS), Malmö/Lund | Sweden |
| Hallands sjukhus Halmstad | Sweden |
| Falun lasarett | Sweden |
| Drottning Silvias barn- och ungdomssjukhus, Sahlgrenska Universitetssjukhuset, Göteborg | Sweden |
| Södersjukhuset, Stockholm | Sweden |
| Karolinska Universitetssjukhuset Solna | Sweden |
| Centrallasarettet Växjö | Sweden |
| Västmanlands sjukhus Västerås | Sweden |
| Universitetssjukhuset i Linköping | Sweden |
| Centre Jean-Violette | Switzerland |
| Universitäts Kinderspital bei der Basel (UKBB) | Switzerland |
| Centro Pediatrico del Mendrisiotto | Switzerland |
| Koç University School of Medicine | Turkey |
| Al Zahra Hospital Sharjah | Private General Hospital UAE | United Arab Emirates |
| Shrewsbury and Telford Hospital NHS Trust | United Kingdom |
| NHS Greater Glasgow and Clyde (NHSGGC) | United Kingdom |
| Great Ormond Street Hospital for Children (GOSH) | United Kingdom |
| Royal Hospital for Sick Children, Edinburgh | United Kingdom |
| Alder Hey Children’s Hospital | United Kingdom |
| John Radcliffe Hospital, Oxford | United Kingdom |